{"id":1166,"date":"2011-03-30T11:44:46","date_gmt":"2011-03-30T10:44:46","guid":{"rendered":"http:\/\/www.meanboyfriend.com\/overdue_ideas\/?p=1166"},"modified":"2011-03-31T12:10:28","modified_gmt":"2011-03-31T11:10:28","slug":"provenance-in-the-dynamic-collaborative-new-science","status":"publish","type":"post","link":"http:\/\/www.meanboyfriend.com\/overdue_ideas\/2011\/03\/provenance-in-the-dynamic-collaborative-new-science\/","title":{"rendered":"Provenance in the Dynamic, Collaborative New Science"},"content":{"rendered":"<p>This presentation by\u00a0Jun Zhao, University of Oxford &#8211; but missed the start as I presented just now, and getting myself sorted&#8230;<\/p>\n<p>Want to use some of the systems\/expertise of libraries (esp. digital preservation) to preserve workflows &#8211; to make experiments repeatable at any time in the future. Project is &#8216;<a href=\"http:\/\/www.wf4ever-project.org\/\">Workflow4Ever<\/a>&#8216; &#8211;\u00a0<a href=\"http:\/\/www.wf4ever-project.org\/\">http:\/\/www.wf4ever-project.org\/<\/a><\/p>\n<p>Need to be able re-run experiments over data sets as data sets grow &#8211; does finding remain true as data grows.<\/p>\n<p>Biology Use case &#8211; &#8216;reuse&#8217;:<\/p>\n<ul>\n<li>Search for existing experiments from <a href=\"http:\/\/myexperiment.org\">myExperiment<\/a> (<a href=\"http:\/\/myexperiment.org\">http:\/\/myexperiment.org<\/a>)\n<ul>\n<li>Challenge &#8211; understand the workflow<\/li>\n<li>Perform test runs with test data and his\/her own data<\/li>\n<li>Read others&#8217; logs<\/li>\n<li>Read annotations to workflows<\/li>\n<\/ul>\n<\/li>\n<li>Reuse scripts from colleagues and perform test that his\/her colleagues are familiar with<\/li>\n<\/ul>\n<p>Provenance Challenges:<\/p>\n<ul>\n<li>Identity<\/li>\n<li>Context<\/li>\n<li>Storage<\/li>\n<li>Retrieval<\/li>\n<\/ul>\n","protected":false},"excerpt":{"rendered":"<p>This presentation by\u00a0Jun Zhao, University of Oxford &#8211; but missed the start as I presented just now, and getting myself sorted&#8230; Want to use some of the systems\/expertise of libraries (esp. digital preservation) to preserve workflows &#8211; to make experiments repeatable at any time in the future. Project is &#8216;Workflow4Ever&#8216; &#8211;\u00a0http:\/\/www.wf4ever-project.org\/ Need to be able [&hellip;]<\/p>\n","protected":false},"author":2,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[1],"tags":[64],"class_list":["post-1166","post","type-post","status-publish","format-standard","hentry","category-uncategorized","tag-provenance"],"_links":{"self":[{"href":"http:\/\/www.meanboyfriend.com\/overdue_ideas\/wp-json\/wp\/v2\/posts\/1166","targetHints":{"allow":["GET"]}}],"collection":[{"href":"http:\/\/www.meanboyfriend.com\/overdue_ideas\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"http:\/\/www.meanboyfriend.com\/overdue_ideas\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"http:\/\/www.meanboyfriend.com\/overdue_ideas\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"http:\/\/www.meanboyfriend.com\/overdue_ideas\/wp-json\/wp\/v2\/comments?post=1166"}],"version-history":[{"count":4,"href":"http:\/\/www.meanboyfriend.com\/overdue_ideas\/wp-json\/wp\/v2\/posts\/1166\/revisions"}],"predecessor-version":[{"id":1193,"href":"http:\/\/www.meanboyfriend.com\/overdue_ideas\/wp-json\/wp\/v2\/posts\/1166\/revisions\/1193"}],"wp:attachment":[{"href":"http:\/\/www.meanboyfriend.com\/overdue_ideas\/wp-json\/wp\/v2\/media?parent=1166"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"http:\/\/www.meanboyfriend.com\/overdue_ideas\/wp-json\/wp\/v2\/categories?post=1166"},{"taxonomy":"post_tag","embeddable":true,"href":"http:\/\/www.meanboyfriend.com\/overdue_ideas\/wp-json\/wp\/v2\/tags?post=1166"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}